BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C05SP1|AL429032
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1054 1372 0.0
3x_Contig992 434 e-121
>3x_Contig1054
Length = 4453
Score = 1372 bits (692), Expect = 0.0
Identities = 692/692 (100%)
Strand = Plus / Minus
Query: 1 cctatggcccatgtatgcatcaaattgacaagccaatctgtccttgaaagctagtgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cctatggcccatgtatgcatcaaattgacaagccaatctgtccttgaaagctagtgaact 641
Query: 61 acactctaactcgttgtttttagtaaaactgttaatatcacggatgaaaacggtcaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acactctaactcgttgtttttagtaaaactgttaatatcacggatgaaaacggtcaagag 581
Query: 121 gcccatgttgatgagaccggccaccaacgaaattccaagaataacggattgaagtttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gcccatgttgatgagaccggccaccaacgaaattccaagaataacggattgaagtttcgt 521
Query: 181 caagcgcgctgtccatgtattgctccttgctgttgtctttgcaggcgcaacgttggataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 caagcgcgctgtccatgtattgctccttgctgttgtctttgcaggcgcaacgttggataa 461
Query: 241 tgaatccagtggcgtggataacgacgtagtattgttactatgattaacgctccctttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgaatccagtggcgtggataacgacgtagtattgttactatgattaacgctccctttctt 401
Query: 301 attctgcaacactgcggaatcctctaagtcgctgcttgtcaccgataaaatatcgtccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 attctgcaacactgcggaatcctctaagtcgctgcttgtcaccgataaaatatcgtccat 341
Query: 361 ttcaccagcgtcaagatccctgatggaatatgtaccgtccacaccaccaacgacccccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttcaccagcgtcaagatccctgatggaatatgtaccgtccacaccaccaacgacccccca 281
Query: 421 agtgtcatttccatccactgatgtacatctatcttttacttcagccatcgcttcgcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agtgtcatttccatccactgatgtacatctatcttttacttcagccatcgcttcgcttta 221
Query: 481 atcaaaaaaaaaatctcctagctccttgattttacgcctgaagcttgatctacaataagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atcaaaaaaaaaatctcctagctccttgattttacgcctgaagcttgatctacaataagt 161
Query: 541 ttatactgacagaattaatactaaaatgtcacacttaatatgtctctgatattccaataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ttatactgacagaattaatactaaaatgtcacacttaatatgtctctgatattccaataa 101
Query: 601 tgatagttagttgccagcaacgttctaaaattcttatcagtcctatatatatttcttgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tgatagttagttgccagcaacgttctaaaattcttatcagtcctatatatatttcttgag 41
Query: 661 tataatcacaaaaccaggacgcctttcctttg 692
||||||||||||||||||||||||||||||||
Sbjct: 40 tataatcacaaaaccaggacgcctttcctttg 9
>3x_Contig992
Length = 4146
Score = 434 bits (219), Expect = e-121
Identities = 232/235 (98%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 682 cctttcctttgttctttgtttcacattttcgtttccgggaaaactgttactccttgttaa 741
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 cctttccttttttcttt-tttcacattttcgtttccgggaaaactgttactccttgttaa 101
Query: 742 ccattttttaatccttattccttttatatttgtcgtatcaaattcccttttttcacaact 801
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 102 ccattttttaatccttattccttttatatttgtcgtatgaaattcccttttttcacaact 161
Query: 802 cattgacctaaataaggaagggaagataaagggagcctgagaagagaagactgcgaagag 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cattgacctaaataaggaagggaagataaagggagcctgagaagagaagactgcgaagag 221
Query: 862 acaagtggcagatgcggtgcaggtgcagtgcatgtgcaggagttagtgatctgca 916
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 acaagtggcagatgcggtgcaggtgcagtgcatgtgcaggagttagtgatctgca 276
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7399
Number of Sequences: 1807
Number of extensions: 7399
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 2
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)